Selected Publications

​ 2024

• Dostál, Z., Žáková, V. and Veselý, P. Dynamic cell-mass movement analyses tool (March 29, 2023). Available at SSRN: https://ssrn.com/abstract=4344841

​​ 2023

• Courtial, J., Bělín, J., Soboňa, M., Locher, M., and Tyc, T. (2024). Shifty invisibility cloaks. Opt. Express 32, 11-25.

• Bouchal, P. , Dvořák, P., Hrtoň, M., Rovenská, K., Chmelík, R., Šikola, T., and Bouchal, Z. (2023). Single-Shot Aspect Ratio and Orientation Imaging of Nanoparticles. ACS Photonics.

• Bouchal, P. , and Bouchal, Z. Reflective Spin–Orbit Geometric Phase from Planar Isotropic Interface. Laser & Photonics Reviews, 2300018.

• Suranova, M., Duris, M. , Netikova, I. S., Brabek, J., Horauzjjhk, T., Juzova, V., ... and Vesely, P. (2023). Primary Assessment of Medicines for Expected Migrastatic Potential with Holographic Incoherent Quantitative Phase Imaging. Biomed. Opt. Express 14, 2689-2708

• Ďuriš, M. , Bouchal, P., and Chmelík, R. (2023). Single-shot super-resolution quantitative phase imaging allowed by coherence gate shaping. APL Photonics, 8(4), 046103.

• Čtyroký, J., Petráček, J., Kuzmiak, V., and Richter, I. (2023). Bound modes in the continuum in integrated photonic LiNbO 3 waveguides: are they always beneficial? Optics Express, 31(1), 44-55. 

• Petráček, J., Kuzmiak, V., Čtyroký, J., and Richter, I. (2023). Guiding light through quasi-TE modes embedded in the radiation continuum. Optics Letters, 48(13), 3463-3466. 

• Zicha, D., and Chmelik, R. (2023). Testing anti-cancer drugs with holographic incoherent-light-source quantitative phase imaging. In Methods in Enzymology (Vol. 679, pp. 255-274). Academic Press. 

​ 2022

• Petráček, J., and Kuzmiak, V. (2022). Bound states in the continuum in waveguide arrays within a symmetry classification scheme. Optics Express, 30(20), 35712-35724.

• Dvořák, P., Klok, P., Kvapil, M., Hrtoň, M., Bouchal, P., Krpenský, J., ... and Šikola, T. (2022). Two-dimensional quantitative near-field phase imaging using square and hexagonal interference devices. Nanophotonics, 11(19), 4375-4386.

• Krajňák, T., Černá, E., Šuráňová, M.  et al. (2022). Replica-mold nanopatterned PHEMA hydrogel surfaces for ophthalmic applications. Scientific Reports, 12(1), 14497.

• Bělín, J., Ferenczi, G., and Courtial, J. (2022). Skew-lens image rotator. Optics Express, 30(15), 25958-25973.

• Čtyroký, J., and  Petráček, J. (2022). Photonic integrated circuits with bound states in the continuum: comment. Optica, 9(7), 681-682.

• Bouchal, P., and Bouchal, Z. (2022). Twisted Rainbow Light and Nature-Inspired Generation of Vector Vortex Beams. Laser Photonics Review, 2200080.

• Petráček, J., and  Kuzmiak, V. (2022). Effect of symmetry breaking on bound states in the continuum in waveguide arrays. Physical Review A, 105(6), 063505.

• Ďuriš, M. , Bouchal, P., Rovenská, K., and Chmelík, R. (2022). Coherence-encoded synthetic aperture for super-resolution quantitative phase imaging. APL Photonics, 7(4), 046105.

• Lepcio, P., Svatík, J., Režnáková, E., Zicha, D., Lesser, AJ, and Ondreáš, F. (2022). Anisotropic solid-state PLA foaming templated by crystal phase pre-oriented with 3D printing: cell supporting structures with directional capillary transfer function. Journal of Materials Chemistry B, 10(15), 2889-2898.

• Zicha, D., (2022). Addressing cancer invasion and cell motility with quantitative light microscopy. Scientific Reports, 12(1), 1-11.

2021

• Bělín, J., Courtial, J., and Tyc, T. (2021).  Lens stars and Platonic lenses. Optics Express, 29(25), 42055-42074.  

• Tučková, T., Šiler, M., Flaes, DEB, Jákl, P., Turtaev, S., Krátký, S., ... and Čižmár, T. (2021). Computational image enhancement of multimode fibre-based holographic endo-microscopy: harnessing the muddy modes. Optics Express, 29(23), 38206-38220.

• Šeda, V., Vojáčková, E., Ondrišová, L., Košťalová, L., Sharma, S., Loja, T., ... and Mráz, M. (2021). FoxO1-GAB1 axis regulates homing capacity and tonic AKT activity in chronic lymphocytic leukemia. Blood, The Journal of the American Society of Hematology, 138(9), str. 758-772.

• Ďuriš, M., and Chmelík, R. (2021). Coherence gate manipulation for enhanced imaging through scattering media by non-ballistic light in partially coherent interferometric system. Optics Letters, 46(18), 4486-4489.

• Rosen, J., Alford, S., Anand, V., Art, J., Bouchal, P., Bouchal, Z., ... and Zhou, H. (2021). Roadmap on recent progress in FINCH technology. Journal of Imaging, 7(10), 197. 

• Fordey, T., Bouchal, P., Schovánek, P., Baránek, M., Bouchal, Z., Dvořák, P., ... and Šikola, T. (2021). Single-Shot Three-Dimensional Orientation Imaging of Nanorods Using Spin to Orbital Angular Momentum Conversion. Nano Letters, 21(17), 7244-7251.

• Bělín, J., Tyc, T., and Horsley, S. A. R. (2021). Optical simulation of quantum mechanics on the Möbius strip, Klein’s bottle and other manifolds, and Talbot effect. New Journal of Physics, 23(3), 033003.

• Bouchal, P. , Chmelík, R., and Bouchal, Z. (2021). Phase of white light and its compatibility to optical path. Optics Express, 29(8), 12398-12412.

2020

• Sheridan, J. T., Kostuk, R. K., Gil, A. F., Wang, Y., Lu, W., Zhong, H., ... and Saravanamuttu, K. (2020). Roadmap on holography. Journal of Optics, 22(12), 123002.
• Štrbková, L., Carson, B. B., Vincent, T., Vesely, P., and Chmelik, R. (2020). Automated interpretation of time-lapse quantitative phase image by machine learning to study cellular dynamics during epithelial–mesenchymal transition. Journal of Biomedical Optics, 25(8), 086502.
• Schovánek, P., Bouchal, P., and Bouchal, Z. (2020). Optical topography of rough surfaces using vortex localization of fluorescent markers. Optics Letters, 45(16), 4468-4471.
• Palušová, V., Renzová, T., Verlande, A., Vaclová, T., Medková, M., Cetlová, L., ... and Uldrijan, S. (2020). Dual Targeting of BRAF and mTOR Signaling in Melanoma Cells with Pyridinyl Imidazole Compounds. Cancers, 12(6), 1516.
• Petráček, J., and Kuzmiak, V. (2020). Dynamics and transport properties of Floquet topological edge modes in coupled photonic waveguides. Physical Review A, 101(3), 033805.
• Čtyroký, J., Petráček, J., Kwiecien, P., Richter, I., and Kuzmiak, V. (2020). Graphene on an optical waveguide: comparison of simulation approaches. Optical and Quantum Electronics, 52(3), 1-14.

• Čtyroký, J., Petráček, J., Kuzmiak, V., Kwiecien, P., and Richter, I. (2020). Silicon waveguides with graphene: coupling of waveguide mode to surface plasmons. Journal of Optics, 22(9), 095801.

2019

• Bouchal, P. , Kapitán, J., Konečný, M., Zbončák, M., and Bouchal, Z. (2019). Non-diffracting light in nature: Anomalously reflected self-healing Bessel beams from jewel scarabs. APL Photonics, 4(12), 126102.

• Bouchal, P ., Štrbková, L., Dostál, Z., Chmelík, R., and Bouchal, Z. (2019). Geometric-phase microscopy for quantitative phase imaging of isotropic, birefringent and space-variant polarization samples. Scientific reports, 9(1), 1-11.

• Bouchal, P. , Dvořák, P., Babocky, J., Bouchal, Z., Ligmajer, F., Hrton, M., ... and Šikola, T. (2019). High-Resolution Quantitative Phase Imaging of Plasmonic Metasurfaces with Sensitivity down to a Single Nanoantenna. Nano Letters, 19(2), 1242-1250. 

• Chmelík, R. (2019). Is Holographic Incoherent Quantitative Phase Imaging an Oxymoron? ELMI 2019 conference, 4-7 June 2019, Brno, Czech Republic. Invited lecture.

2018

• Dvořák, P., Kvapil, M., Bouchal, P., Édes, Z., Šamořil, T., Hrtoň, M., ... and Šikola, T. (2018). Near-field digital holography: a tool for plasmon phase imaging. Nanoscale, 10(45), 21363-21368.

• Tolde, O., Gandalovičová, A., Křížová, A., Veselý, P., Chmelík, R., Rosel, D., and Brábek, J. (2018). Quantitative phase imaging unravels new insight into dynamics of mesenchymal and amoeboid cancer cell invasion. Scientific reports, 8(1), 1-13.

• Chmelík, R. , Ďuriš, M., Štrbková, L. (2018). Quantitative phase imaging in turbid media by coherence-controlled holographic microscopy. In Unconventional Optical Imaging. Proceedings of SPIE. Strasbourg, France, p. 1-12.

• Bouchal, P. ; Chmelík, R.; Bouchal, Z (2018). Dual-polarization interference microscopy for advanced quantification of phase associated with the image field. Optics Letters 43 (3).

• Gomez, C. A., Sutin, J., Wu, W. C., Fu, B. Y., Uhlirova, H., Devor, A., Boas, D. A., Sakadzic, S. and Yasseen, M. A.(2018). Phasor analysis of NADH FLIM identifies pharmacological disruptions to mitochondrial metabolic processes in the rodent cerebral cortex. PLoS one, 13(3), e0194578.

• Uhlirova, H. , Tian, P., Kılıç, K., Thunemann, M., Sridhar, V. B., Chmelik, R., ... and Saisan, P. A. (2018). Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo. JoVE (Journal of Visualized Experiments), (135), e57214. 

2017

• Strbkova, L. , Zicha, D., Vesely, P., Chmelik, R. (2017). Automated classification of cell morphology by coherence-controlled holographic microscopy. Journal of Biomedical Optics 22 (8).

• Gal, B., Vesely, M., Collakova, J., Nekulova, M., Juzova, V., Chmelik, R., Vesely, P. (2017). Distinctive behaviour of live biopsy-derived carcinoma cells unveiled using coherence-controlled holographic microscopy. Plos One 12 (8)

• Bouchal, P. ,  Bouchal, Z. (2017). Flexible non-diffractive vortex microscope for three-dimensional depth-enhanced super-localization of dielectric, metal and fluorescent nanoparticles. Journal of Optics 19 (10)

• Bouchal, P. , Strbkova, L., Dostal, Z., Bouchal, Z. (2017). Vortex topographic microscopy for full-field reference-free imaging and testing. Optics Express 25(18), p. 21428-21443.

• Uhlířová, H. , Peifang , T., Kilic, K., Thunemann, M., Sridhar, V., Bartsch, H., Dale, A., Devor, A.,  Saisan, P. (2017). Neurovascular Network Explorer 2.0: A Database of 2-Photon Single Vessel Diameter Measurements from Mouse SI Cortexin Response To Optogenetic Stimulation. Frontiers in Neuroinformatics, 4.

• Cetin, AE., Drsata, M., Eksioglu, Y., Petracek, J. (2017). Extraordinary Transmission Characteristics of Subwavelength Nanoholes with Rectangular Lattice. Plasmonics 12 (3), p. 655 - 661.
• Yaseen, MA., Sutin, J., Wu, WC., Fu, BY.,  Uhlirova, H., Devor, A., Boas, DA., Sakadzic, S. (2017). Fluorescence lifetime microscopy of NADH distinguishes alterations in cerebral metabolism in vivo. Biomedical Optics Express 8 (5), p. 2368 - 2385.

• Babocky , J.,  Krizova, A., Strbkova L., Kejik, L., Ligmajer, F.,  Hrton, M., Dvorak, P., Tyc, M., Collakova, J., Krapek, V., Kalousek, R., Chmelík, R., Sikola, T. (2017). Quantitative 3D Phase Imaging of Plasmonic Metasurfaces. ACS Photonics 4 (6), p. 1389 - 1397.

• Gandalovičová, A., Rösel, D., Fernandes, M.,  Veselý, P., Heneberg, P., Čermák, V., Petruželka, L., Kumar, S., Sanz-Moreno, V., Brábek, J. (2017). Migrastatics—anti-metastatic and anti-invasion drugs: promises and challenges. Trends in Cancer 3(6), p. 391-406.

2016

• Uhlirova, H ; Kilic, K; Tian, PF; Thunemann, M; Desjardins, M; Saisan, PA; Sakadzic, S; Nese, TV; Mateo, C; Cheng, Q; Weldy, KL; Razoux, F; Vandenberghe, M; Cremonesi, JA; Ferri, CGL; Nizar, K; Sridhar, VB; Steed, TC; Abashin, M; Fainman, Y; Masliah, E; Djurovic, S; Andreassen, OA; Silva, GA; Boas, DA; Kleinfeld, D; Buxton, RB; Einevoll, GT; Dale, AM; Devor, A, 2016: Cell type specificity of neurovascular coupling in cerebral cortex. ELIFE 5

• Uhlirova, H ; Kilic, K; Tian, PF; Sakadzic, S; Gagnon, L; Thunemann, M; Desjardins, M; Saisan, PA; Nizar, K; Yaseen, MA; Hagler, DJ; Vandenberghe, M; Djurovic, S; Andreassen, OA; Silva, GA; Masliah, E; Kleinfeld, D; Vinogradov, S; Buxton, RB; Einevoll, GT; Boas, DA; Dale, AM; Devor, A, 2016: The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements. Philosophical Transactions of the Royal Society B-Biological Sciences 371 (1705)

• Zemanova, J; Hylse, O; Collakova, J; Vesely, P; Oltova, A; Borsky, M; Zaprazna, K; Kasparkova, M; Janovska, P; Verner, J; Kohoutek, J; Dzimkova, M; Bryja, V; Jaskova, Z; Brychtova, Y; Paruch, K; Trbusek, M , 2016: Chk1 inhibition significantly potentiates activity of nucleoside analogs in TP53-mutated B-lymphoid cells. Oncotarget 7 (38), p. 62091 - 62106.

• Strbkova, L ; Manakhov, A; Zajickova, L; Stoica, A; Vesely, P; Chmelik, R, 2016: The adhesion of normal human dermal fibroblasts to the cyclopropylamine plasma polymers studied by holographic microscopy. Surface & Coatings Technology 295, p. 70 - 77.

• Petracek, J , 2016: Nonreciprocal switching in nonlinear plasmonic couplers with loss and gain. Optical and Quantum Electronics 48 (9)

• Eksioglu, Y; Cetin, AE; Petracek, J, 2016: Optical Response of Plasmonic Nanohole Arrays: Comparison of Square and Hexagonal Lattices. Plasmonics 11 (3), p. 851 - 856.

• Cetin, AE; Drsata, M; Eksioglu, Y; Petracek, J, 2016: Effect of Lattice Geometry on Optical Transmission through Subwavelength Nanohole Arrays. 2016 10TH International Congress on Advanced Electromagnetic Materials in Microwaves and Optics (Metamaterials), p. 280 - 282.

2015

• TRUNEC, M; MACA, K; CHMELIK, R , 2015: Polycrystalline alumina ceramics doped with nanoparticles for increased transparency. JOURNAL OF THE EUROPEAN CERAMIC SOCIETY 35 (3), p. 1001 - 1009.

• BARANEK, M; BOUCHAL, P; SILER, M; BOUCHAL, Z, 2015: Aberration resistant axial localization using a self-imaging of vortices. OPTICS EXPRESS 23 (12), p. 15316 - 15331.

• HARTINGER, J; VESELY, P; NETIKOVA, I; MATOUSKOVA, E; PETRUZELKA, L, 2015: The Protective Effect of Pyrimidine Nucleosides on Human HaCaT Keratinocytes Treated with 5-FU. ANTICANCER RESEARCH 35 (3), p. 1303 - 1310.

• BALVAN , J; KRIZOVA, A; GUMULEC, J; RAUDENSKA, M; SLADEK, Z; SEDLACKOVA, M; BABULA, P; SZTALMACHOVA, M; KIZEK, R; CHMELIK, R; MASARIK, M, 2015: Multimodal Holographic Microscopy: Distinction between Apoptosis and Oncosis. PLOS ONE 10 (3)

• EKSIOGLU, Y; PETRACEK, J, 2015: Dynamical analysis of double-ring resonator with non-instantaneous Kerr response and effect of loss. OPTICAL AND QUANTUM ELECTRONICS 47 (10), p. 3323 - 3335.

• COLLAKOVA, J ; KRIZOVA, A; KOLLAROVA, V; DOSTAL, Z; SLABA, M; VESELY, P; CHMELIK, R , 2015: Coherence-controlled holographic microscopy enabled recognition of necrosis as the mechanism of cancer cells death after exposure to cytopathic turbid emulsion. JOURNAL OF BIOMEDICAL OPTICS 20 (11).

• DOSTAL, Z ; SLABY, T; KVASNICA, L; LOSTAK, M; KRIZOVA, A; CHMELIK, R, 2015: Automated alignment method for coherence-controlled holographic microscope. JOURNAL OF BIOMEDICAL OPTICS 20 (11).

• KOLLAROVA, V ; COLLAKOVA, J; DOSTAL, Z; VESELY, P; CHMELIK, R, 2015: Quantitative phase imaging through scattering media by means of coherence-controlled holographic microscope. JOURNAL OF BIOMEDICAL OPTICS 20 (11)

• KRIZOVA, A; COLLAKOVA, J; DOSTAL, Z; KVASNICA, L; UHLIROVA, H; ZIKMUND, T; VESELY, P; CHMELIK, R , 2015: Dynamic phase differences based on quantitative phase imaging for the objective evaluation of cell behavior. JOURNAL OF BIOMEDICAL OPTICS 20 (11)

• COUVRAT-DESVERGNES, G; SALAMA, A; LE BERRE, L; EVANNO, G; VIKLICKY, O; HRUBA, P; VESELY, P; GUERIF, P; DEJOIE, T; ROUSSE, J; NICOT, A; BACH, JM; ANG, E; FOUCHER, Y; BROUARD, S; CASTAGNET, S; GIRAL, M; HARB, J; PERREAULT, H; CHARREAU, B; LORENT, M; SOULILLOU, JP , 2015: Rabbit antithymocyte globulin-induced serum sickness disease and human kidney graft survival. JOURNAL OF CLINICAL INVESTIGATION125 (12), p. 4655 - 4665.

• BOUCHAL, P; CELECHOVSKY, R; BOUCHAL, Z , 2015: Polarization sensitive phase-shifting Mirau interferometry using a liquid crystal variable retarder. OPTICS LETTERS 40 (19), p. 4567 - 4570.

• BALVAN , J; GUMULEC, J; RAUDENSKA, M; KRIZOVA, A; STEPKA, P; BABULA, P; KIZEK, R; ADAM, V; MASARIK, M, 2015: Oxidative Stress Resistance in Metastatic Prostate Cancer: Renewal by Self-Eating. PLOS ONE 10 (12)

• PLOSCHNER , M; KOLLAROVA, V; DOSTAL, Z; NYLK, J; BARTON-OWEN, T; FERRIER, DEK; CHMELIK, R; DHOLAKIA, K; CIZMAR, T, 2015: Multimode fibre: Light-sheet microscopy at the tip of a needle. SCIENTIFIC REPORTS 5

• SALAMA, A; COUVRAT -DESVERGNES, G; LE BERRE, L; EVANNO, G; VIKLICKY, O; HRUBA, P; VESELY, P; GUERIF, P; DEJOIE, T; NICOT, AB; BACH, JM; BROUARD, S; CASTAGNET, S; GIRAL, M; HARB, J; FOUCHER, Y; LORENT, M; SOULILLOU, JP , 2015: Increased Late Graft Loss in Kidney Recipients With Serum Sickness Disease Following Anti-Thymocyte Globulin Induction: Relation With an Anti-Neu5Gc Response. TRANSPLANTATION 99 (11), p. S137 - S138.

2014

• BOUCHAL, P; BOUCHAL, Z , 2014: Non-iterative holographic axial localization using complex amplitude of diffraction-free vortices. OPTICS EXPRESS 22 (24), p. 30200 - 30216.

• BOUCHAL, Z; CHLUP, V; CELECHOVSKY, R; BOUCHAL, P; NISTOR, IC, 2014: Achromatic correction of diffractive dispersion in white light SLM imaging. OPTICS EXPRESS 22 (10), p. 12046 - 12059.

• LOSTAK, M; CHMELI K, R; SLABA, M; SLABY, T, 2014: Coherence-controlled holographic microscopy in diffuse media. OPTICS EXPRESS 22 (4), p. 4180 - 4195.

• ZIKMUND, T; KVASNICA, L; TYC, M; KRIZOVA, A; COLLAKOVA, J; CHMELIK, R , 2014: Sequential processing of quantitative phase images for the study of cell behaviour in real-time digital holographic microscopy. JOURNAL OF MICROSCOPY 256 (2), p. 117 - 125.

• CHMELIK, R; SLABA, M; KOLLAROVA, V; SLABY, T; LOSTAK, M; COLLAKOVA, J; DOSTAL, Z, 2014: The Role of Coherence in Image Formation in Holographic Microscopy. PROGRESS IN OPTICS, VOL 59 59 , p. 267 - 335.

• MESTAK , O; MATOUSKOVA, E; SPURKOVA, Z; BENKOVA, K; VESELY, P; MESTAK , J; MOLITOR, M; POMBINHO, A; SUKOP, A, 2014: Mesenchymal Stem Cells Seeded on Cross-Linked and Noncross-Linked Acellular Porcine Dermal Scaffolds for Long-Term Full-Thickness Hernia Repair in a Small Animal Model. ARTIFICIAL ORGANS38 (7), p. 572 - 579.

• BUSBY, SA; ROBB, A; LANG, S; TAKEUCHI, Y; VESELY, P; SCOBIE, L, 2014: Antibiotic susceptibility and resistance of Staphylococcus aureus isolated from fresh porcine skin xenografts: Risk to recipients with thermal injury. BURNS 40 (2), p. 288 - 294.

2013

• LACH, R; HUTAR, P; VESELY, P; NEZBEDOVA, E; KNESL, Z; KOCH, T; BIEROGEL, C; GRELLMANN, W , 2013: Assessment with indentation techniques of the local mechanical behavior of joints in polymer parts. POLIMERY 58 (42349), p. 900 - 905.

• NIZAR, K; UHLIROVA, H; TIAN, PF; SAISAN, PA; CHENG, Q; REZNICHENKO, L; WELDY, KL; STEED, TC; SRIDHAR, VB; MACDONALD, CL; CUI, JX; GRATIY, SL; SAKADZIC, S; BOAS, DA; BEKA, TI; EINEVOLL, GT; CHEN, J; MASLIAH, E; DALE, AM; SILVA, GA; DEVOR, A, 2013: In vivo Stimulus-Induced Vasodilation Occurs without IP3 Receptor Activation and May Precede Astrocytic Calcium Increase. JOURNAL OF NEUROSCIENCE 33 (19), p. 8411 - 8422.

• SLABY, T; KOLMAN, P; DOSTAL, Z; ANTOS, M; LOSŤAK, M; CHMELIK, R, 2013: Off-axis setup taking full advantage of incoherent illumination in coherence-controlled holographic microscope. OPTICS EXPRESS 21(12), p. 14747 - 14762.

• BOUCHAL, P; BOUCHAL, Z , 2013: Wide-field common-path incoherent correlation microscopy with a perfect overlapping of interfering beams. JOURNAL OF THE EUROPEAN OPTICAL SOCIETY-RAPID PUBLICATIONS 8(13011)

• ROSEL, D; BRABEK, J; VESELY, P; FERNANDES, M, 2013: Drugs for solid cancer: the productivity crisis prompts a rethink. ONCOTARGETS AND THERAPY 6, p. 767 - 777.

• MATOUSKOVA, M; VESELY, P; DANIEL, P; MATTIUZZO, G; HECTOR, RD; SCOBIE, L; TAKEUCHI, Y; HEJNAR, J , 2013: Role of DNA Methylation in Expression and Transmission of Porcine Endogenous Retroviruses. JOURNAL OF VIROLOGY 87 (22), p. 12110 - 12120.

• BOUCHAL, P; BOUCHAL, Z, 2013: Concept of coherence aperture and pathways toward white light high-resolution correlation imaging. NEW JOURNAL OF PHYSICS 15

• SCOBIE, L; PADLER-KARAVANI, V; LE BAS-BERNARDET, S; CROSSAN, C; BLAHA, J; MATOUSKOVA, M; HECTOR, RD; COZZI, E; VANHOVE, B; CHARREAU, B; BLANCHO, G; BOURDAIS, L; TALLACCHINI, M; RIBES, JM; YU, H; CHEN, X; KRACIKOVA, J; BROZ, L; HEJNAR, J; VESELY, P; TAKEUC , 2013: Long-Term IgG Response to Porcine Neu5Gc Antigens without Transmission of PERV in Burn Patients Treated with Porcine Skin Xenografts. JOURNAL OF IMMUNOLOGY 191 (6), p. 2907 - 2915.

• TYC, M; KVASNICA, L; SLABA, M; CHMELIK, R, 2013:  Numerical refocusing in digital holographic microscopy with extended-sources illumination.:Numerical refocusing in digital holographic microscopy with extended-sources illumination. OPTICS EXPRESS 21 (23), p. 28258 - 28271.

2012

• BOUCHAL, P; BOUCHAL, Z, 2012: Selective edge enhancement in three-dimensional vortex imaging with incoherent light. Optics Letters 37 (14), p. 2949 - 2951.

• TOLDE, O; ROSEL, D; JANOSTIAK, R; VESELY, P; BRABEK,  J, 2012: Dynamics and Morphology of Focal Adhesions in Complex 3D Environment. Folia Biologica 58 (5), p. 177 - 184.

• HARTINGER, J; VESELY, P; MATOUSKOVA, E; ARGALACSOVA, S; PETRUZELKA, L; NETIKOVA, I, 2012: Local Treatment of Hand-Foot Syndrome with Uridine/Thymidine: In Vitro Appraisal on a Human Keratinocyte Cell Line HaCaT. Scientific World Journal 2012 (7), p. 1 - 6.

• CHMELIK, R, 2012: Coherent Imaging with Incoherent Light in Digital Holographic Microscopy. 18TH CZECH-POLISH-SLOVAK OPTICAL CONFERENCE ON WAVE AND QUANTUM ASPECTS OF CONTEMPORARY OPTICS8697

• ANTOS, M; COLLAKOVA, J; VESELY, P; CHMELIK, R; KRIZOVA, A, 2012: System for coherence-controlled holographic microscopy of living cells. 18TH CZECH-POLISH-SLOVAK OPTICAL CONFERENCE ON WAVE AND QUANTUM ASPECTS OF CONTEMPORARY OPTICS 8697

• HENZLOVA, M; LOSTAK, M; CHMELIK, R, 2012: Theoretical study of coherence-controlled holographic microscopy in the presence of scattering media. 18TH CZECH-POLISH-SLOVAK OPTICAL CONFERENCE ON WAVE AND QUANTUM ASPECTS OF CONTEMPORARY OPTICS 8697

2011

• BOUCHAL, P; KAPITAN, J; CHMELIK, R; BOUCHAL, Z, 2011: Point spread function and two-point resolution in Fresnel incoherent correlation holography. Optics Express 19(16), p. 15603-15620.

• CHMELIK, R, 2011: Advances in Digital Holographic Microscopy: Coherence-Controlled Microscope. Holography: Advances and Modern Trends II (Vol. 8074, pp. 9-15). SPIE.

2010

• TOLDE, O; ROSEL, D; VESELY, P; FOLK, P; BRABEK, J, 2010:  The structure of invadopodia in a complex 3D environment. European journal of cell biology, 89(9), 674-680.

• KOLMAN, P; CHMELIK, R, 2010: Coherence-controlled holographic microscope. Optics Express 18(21), p. 21990-22003.

• LOVICAR, L; KOMRSKA, J; CHMELIK, R, 2010: Quantitative-phase-contrast imaging of a two-level surface described as a 2D linear filtering process. Optics Express 18(20), p. 20585-20594.

• TOLDE, O; ROSEL, D; MIERKE, CT; PANKOVA, D; FOLK, P; VESELY, P; BRABEK, J, 2010: Neoplastic progression of the human breast cancer cell line G3S1 is associated with elevation of cytoskeletal dynamics and upregulation of MT1-MMP. Internatiolnal Journal of Oncology 36(4), p. 833-839.

• BRABEK, J; MIERKE, CT; ROSEL, D; VESELY, P; FABRY, B, 2010: The role of the tissue microenvironment in the regulation of cancer cell motility and invasion. Cell Communication and Signaling, 8(1), 1-8.

• ZIKMUND, T; KVASNICA, L; UHLIROVA, H; LOVICAR, L; CHMELIK, R, 2010: Dynamical Deformation Compensation of Phase in Digital Holographic Microscopy. 17TH SLOVAK-CZECH-POLISH OPTICAL CONFERENCE ON WAVE AND QUANTUM ASPECTS OF CONTEMPORARY OPTICS 7746

• LOSŤAK, M; KOLMAN, P; DOSTAL, Z; CHMELIK, R, 2010: Diffuse light imaging with a coherence controlled holographic microscope. 17TH SLOVAK-CZECH-POLISH OPTICAL CONFERENCE ON WAVE AND QUANTUM ASPECTS OF CONTEMPORARY OPTICS 7746

• TYC, M; CHMELIK, R, 2010: Numerical Refocusing of Planar Samples Unlimited. 17TH SLOVAK-CZECH-POLISH OPTICAL CONFERENCE ON WAVE AND QUANTUM ASPECTS OF CONTEMPORARY OPTICS 7746

2009

• JANECKOVA, H; VESELY, P; CHMELIK, R, 2009: Proving Tumour Cells by Acute Nutritional/Energy Deprivation as a Survival Threat: A Task for Microscopy. Anticancer Research 29 (6), p. 2339 - 2345.

• KOLMAN, P; PICA, A; CARVOU, N; BOYDE, A; COCKCROFT, S; LOESCH, A; PIZZEY, A; SIMEONI, M; CAPASSO, G; UNWIN, RJ, 2009: Insulin uptake across the luminal membrane of the rat proximal tubule in vivo and in vitro. American Journal of Physiology-Renal Physiology 296(5), p. F1227 - F1237.

• VESELY, P; ROSEL, D; PANKOVA, D; TOLDE, O; BLASE, C; MATOUSKOVA, E; FOLK, P; BRABEK, J; BEREITER-HAHN, J, 2009: Confocal Microscopy Reveals Myzitiras and Vthela Morphotypes as New Signatures of Malignancy Progression. Scanning 31(3), p. 102 - 106.